Daniel,
In a very real way, I feel your pain. I replaced the motor mounts on my 1250 nightmare and am experiencing excessive vibration as well.
I have discussed this problem ad nausium on this site, and those in the know have been sympathetic, understanding, suggested many things to try, told me that I did the job wrong, advised me to take it to another near-by enthusiast, and noting seems to help it enough to make a big difference.
I used Cub Cadet OEM mount kits, and had the engine cradle modified. The instructions in the kits recommend tightening the mount bolts to 100 inch pounds. Tightening up the mounts has helped somewhat. I am unclear as to how long it will last. It has been stated to me that doing so ruined some expensive mounts. I don't know. I used some rubber and felt in strategic [places to calm some of the rattling. I guess it helped some.
I don't know what to do anymore. I can't even complain about it. I do feel that the engine cradle modification is causing some of the problem because the cradle cannot move independently, as it could before this change. That is just a thought, and I have nothing upon which to base it. I'll pull the engine again next summer, put a crankshaft balancer in it and see what happens. I may buy a set of motor mounts ant try it without the engine cradle modification. That might help.
If I had a solution, I would share it. It seems as if many have ideas, and none of those ideas have really worked.
Good luck. I would appreciate knowing if you find something that really works.
Be well...
Brian Wittman
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The only things that should be green and yellow are the NDSU Bison. GO Bison!